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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community … and evolutionary genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring
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Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov.
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, including … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … , PCT application PCT/US2021/018050 (published 2021). Arkin, AP, et al. KBase: The United States Department of Energy …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI … Nayfach and  Nikos Kyrpides , was  recently published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … to customize the crop for additional end products. The genetic diversity within this set of plants, each with a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of actinobacteria Streptomyces is more than just a funny word. The … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Natural Prodcast Episode 22: Alison Narayan
… Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: … In this episode, Dan and Jackie talk to Alison Narayan , …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their potential …
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