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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over … public databases and recovered more than 3,000 others from environmental datasets. All of the annotations and data … 3,000 fungal mitochondrial genomes from existing data without any new sequencing. In a parallel effort to search …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change … in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the deep ocean. With … in late 2013, when a large patch of warm ocean water about a third the size of the United States began forming in …
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Year in Review: JGI’s 2018 Progress Report Available Now
… Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , … Copies are available online – click here to go download one from the archive of JGI Progress Reports. Print copies will …
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Enlarging Windows into Understanding Gene Functions
… The technology expresses the transcription factor proteins from a DNA template amplified directly from either genomic DNA or complementary DNA (cDNA), … tough as it has been 10 years ago,” he said. “We thought about reconstructing gene regulatory networks, understanding …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in … This year’s list features 6,849 individual researchers from 67 countries. Those from the JGI whose publications … develop a method for identifying polyploid subgenomes without needing to know the genomes of their ancestors. Tanja …
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JGI & KBase at PAG XXVII
… January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE … will be at Booth 509. Stop by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply …
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2022 Progress Report
… home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the …
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JGI@25: Strengthening Soybean
… ASR can decimate up to 60-90% of its yield.  (Learn more about the soybean genome sequence and ASR in this JGIota, a … podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis of the French National Institute … in size). So, the JGI helped a consortium of researchers from various institutions, including INRAE as well as the …
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2021 Progress Report
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Toward More Efficient Artificial Photosynthesis
… system. The Impact Photosynthesis harnesses carbon captured from the atmosphere in a process that generates energy. The … pathway that would more efficiently remove carbon from the atmosphere than current natural processes and use … a long-term effort to capture and utilize the excess carbon from the atmosphere for producing high value bioproducts. …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to applying … mentors, postdoc Yumary Vasquez, was herself a program alum from the 2022 cohort.  The UC Merced interns attended … DOE RENEW grant initiative when school starts in the fall.  Outside of the technical aspect of her project, Hour …
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Progress Reports: 2002–2020
… to view downloadable pdfs of previous Progress Reports from the Joint Genome Institute.  …
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