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Mechanistic insights into consumption of the food additive xanthan gum by the human gut microbiota
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Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi
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An Integrated Dataset to Understand Ecosystem Interaction
… features to large ecosystem-level processes for the first time. By collecting data from 27 different poplar ( … the tree’s production as a biofuel feedstock. Public accessibility to the data made available through this … that contribute to a sustainable bioeconomy. Summary The 27 samples studied by researchers came from two environments: …
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Building Sphagnum Genomic Resources
… to be larger than any other single plant genus. Peatlands accumulate partially decomposed matter, and researchers … the CSP, researchers are aiming to have two high quality reference genomes for peat-forming species that occupy … novel species of Acidobacteria through an approved CSP proposal. The researchers found that these species encode a …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Digging into Microbial Ecosystems Deep Underground
… and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re looking … The video complements a recently published paper with first author Amundson in the journal Microbiome . The work … Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user facilities through the …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Nikos Kyrpides (Biology and Biochemistry) Dan Rokhsar (Cross-field) Simon Roux (Biology and Biochemistry, … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new program called iPHoP …
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Changes in ambient temperature are the prevailing cue in determining Brachypodium distachyon diurnal gene regulation
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The genome of the intracellular bacterium of the coastal bivalve, Solemya velum: a blueprint for thriving in and out of symbiosis
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A transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains.
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How Filamentous Fungi Sense Food
… regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University … The fungi are similarly armed with a variety of PCWDEs to first break down the components of plant cell walls, which … Laboratory under US Department of Energy Contract DE-AC02-05CH11231, a Joint Genome Institute Community Science …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work … The Impact The Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) was enacted by Congress … and 2010. DNA was extracted from the samples that were sequenced by the U.S. Department of Energy (DOE) Joint …
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