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… assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated … of where those binding sites are in the genome — those sequences are moving around, disappearing and appearing in … overcame some of these challenges by using  in vitro -expressed TFs and fragmented genomic DNA, eliminating the need …

… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals … collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing recently burned …

… Interns contributed to a number of projects, from refining lab … artificial intelligence to aspects of research questions Another intern summer has closed at the U.S. Department … and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …

… deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria … resist foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes … The work conducted by the U.S. Department of Energy Joint Genome …

… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a combination of sequencing … thousands to millions of copies of a particular DNA sequence from just a few pieces of DNA. Summary The extreme … The work conducted by the U.S. Department of Energy Joint Genome …

… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited … includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined in the Methodology section … Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 …

… Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full roster of members. … Microbiome ecologist Shade became Director of Research at France’s Centre National de la Recherche Scientifique (CNRS) …

… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received … developed and applied novel computational and experimental sequence-based methods for elucidating the gene regulatory …

… regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … therefore play a critical role in the global carbon cycle, and are of significant interest for their … without some kind of test to even look if these genes are expressed, you have to be very agnostic and very careful,” …

… to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to the development of multicellular … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … facilitating the remixing of genes in the next generation of flowering vegetation. In return for their services, …