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SIPs with Standards
… Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … reusable, and more insightful, for the future of studying microbial communities.   …
Learn more
Help from Citrus’ Bitter, Hardier Cousin
… orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the … are senior authors of the  recent study published in  The Plant Journal.  this study included the discovery of … to citrus greening disease. Trifoliate orange may be a plant of bitter fruit, yet sweet are its genetic secrets. …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon … At HudsonAlpha, she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited … Setaria viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the …
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IMG Webinar Series
… Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight … State University and colleagues are interested in the microbial communities that live on Alaska’s glacially … public agricultural research corporation, is focused on microbial interactions on the Amazon forest floor. Alicia …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … and understanding viral genomes and their interactions with microbial hosts. The second project, “ A consortium … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Gut Fungi: Unexpected Source of Novel Chemicals
… compounds may also be involved in how the fungi metabolize plant biomass, which could inform how scientists can more easily convert plants into carbon-neutral biofuels . What’s more, many … to understand the outsized role the fungi play in digesting plant material in herbivore guts. A deeper dive into the …
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Len Pennacchio
… of Human Genomics, Sanger Center 2011-  Co-Organizer “Systems Biology of Gene Regulation and Genome Editing,” Cold …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers … what falls within that single beam. When it comes to microbial communities, scientists have historically been … environment — whether that be soil, animal hosts, marine ecosystems, etc.  “So, they must be doing something interesting …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Many fungi have beneficial symbiotic relationships with plants and bacteria; in many instances, fungal physiology is … Richard Dick of The Ohio State University aims to study plant drought resilience in the Sahel, an arid region of … conditions. The proposal targets the CSP focus area in plant microbiomes, as well as those in inter-organismal …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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