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… were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI …

… invaluable scientific and technical experiences.  Genomic data scientist Deanna Beatty sat down with interns hosted at … CalTeach initiative. During their time at the Joint Genome Institute, they interacted with interns from other … like a lot of fields would like to have more data science integrated into them, especially with, like, this rise of, …

… and even how quickly. But there's a catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This …

… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last … get these specialized snapshots of a freshwater ecosystem. …

… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. … from looking at single organisms to applying a broader ecosystem perspective, involving more multidisciplinary teams. …

… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … 673–688 Vyshenska et al. 2023. A standardized quantitative analysis strategy for stable isotope probing metagenomics. … PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in …

… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of …