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Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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JGIota: Looking Back at Methane-Making Microbes
… 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that could help us …
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Benjamin Cole
In addition, Dr. Cole is focusing on how individual plant cells respond to their biotic environment using emerging single-cell characterization technologies (scRNA-seq, Spatial … of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package … Education … Selected …
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An Automated Tool for Assessing Virus Data Quality
… vary widely. In a previous effort, an international consortium recommended specific guidelines and best practices … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … from IMG/VR , a database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… their local environments; for example, crop and ornamental seeds sold for the upper Midwest are often very different … to switchgrass through more targeted genome editing techniques to customize the crop for additional end … have different levels of performance,” Juenger said. “The novelty here is that we’re trying to actually figure out …
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Contribution of calcium ligands in substrate binding and product release in the Acetovibrio thermocellus glycoside hydrolase family 9 cellulase CelR
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A Grass Model to Help Improve Giant Miscanthus
… genes provided by these chromosomes can contribute to novel traits. M. sinensis is a tetraploid, with four sets of …
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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FICUS Overview
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Waiting to Respire
… of life on Earth, and led to the development of multicellular organisms. Not all bacterial lineages harnessed … researchers from the Bigelow Laboratory for Ocean Sciences, Microbial Genome Program head Tanja Woyke of the U.S. … and research scientist Frederik Schulz in Woyke’s Single Cells group had generated and analyzed single amplified …
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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