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… Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused … can also act as a protective layer insulating permafrost from the warming regional temperatures. For this reason, the … prevent methane production by routing the carbon away from methanogens. In The ISME Journal, a team led by …

… metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before … specific metabolic processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on sequence reads to link …

… class  Dothideomycetes includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant … predicting plant pathogens (blue) vs saprobes (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using … whole genome data from newly sequenced genomes, they also built a high-quality phylogenetic tree for  …

… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI scientists on … larger mission of the U.S. Department of Energy. Students also worked with their mentors to practice and develop … The topics students worked on ranged far and wide — from implementing new data visualization tools, to using …

… PDF] Q3 – Report on new computational approaches for the annotation of genomic data. [Download PDF] Q4 – Report on a … Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS …

… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how invaluable their time at …

… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants …

… This summer marked the first fully in-person internship experience in several years for students and … 2023 gave interns the opportunity to be fully immersed in not only their work, but the opportunity to collaborate with and learn from fellow researchers onsite as well. …

… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly … the diatom Fragilariopsis cylindrus . At that time, they noted that the F. cylindrus genome encoded more proteins … on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome …

… how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he …

… and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project …

… of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel capabilities …