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Comparative genomics reveals insights into characterization and distribution of quorum sensing-related genes in Shewanella algae from marine environment and clinical sources
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Comparative Analyses of Four Reference Genomes Reveal Exceptional Diversity and Weak Linked Selection in the Yellow Monkeyflower (Mimulus guttatus) Complex
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Graduate Students Get Thesis Research Opportunity at the JGI
… of the latest call , a total of 70 graduate students from 52 universities were selected to carry out part of their … Structure and Methane Production in California’s Canal System,” she will work with Susannah Tringe, JGI’s User … to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of resolving …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … Internship co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the … their perspectives and views” helped her further develop management and supporting skills for the students. Being …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis teams. Together, these teams provide analysis … and during Nitrogen-Fixing Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et al. …
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Exploring the limit of metazoan thermal tolerance via comparative proteomics: thermally induced changes in protein abundance by two hydrothermal vent polychaetes
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JGI@25: The Little Alga That Could
… JGI’s early sequencing of C. reinhardtii became available, data mined by the JGI shows that those sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … the impact of this tiny, single-celled organism as a model system. “People name genes based on similarity to the Chlamy …
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A Step Toward Controlling Soybean Rust
… as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien … plant genome , and JGI  published its genome sequence in 2010.       … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora
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Comparative transcriptomics of CAZy enzymes in white- and brown-rot agaricomycetes: Evolutionary insights into lignocellulose degradation and the relevance of GH16 glycoside hydrolase functional divergence
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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