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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … ecosystems and organisms than ever before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, … and analysis. This way, JGI users — both primary, data-generating users, as well as secondary, data-downloading …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … uncultivated microbes and viruses. Prior to joining the JGI, she was a Bioinformatics Program Fellow at the Gordon … Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative …
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When “The Blob” Made It Hotter Under the Water
… samples were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … flux in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow … Oceanographic Research (SCOR), the US Department of Energy (DOE) Joint Genome Institute, an Office of Science User …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from … worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Evolutionary instability of CUG-Leu in the genetic code of budding yeasts
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating … increasingly collaborative and multidisciplinary nature of DOE mission science projects, this proposal call aims to … research exploiting a diversity of capabilities to generate datasets beyond what each facility could generate …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… But what trends govern those virus-host interactions? Do generalist viruses run rampant, capable of infecting … postdoctoral researcher at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
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Conifer DBMagic: a database housing multiple de novo transcriptome assemblies for 12 diverse conifer species
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Enhancing Terminal Deoxynucleotidyl Transferase Activity on Substrates with 3′ Terminal Structures for Enzymatic De Novo DNA Synthesis
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