Search

… JGI’s role in enabling complex biological and environmental systems research.  …

… workflow, then uses a machine-learning model to give its integrated prediction a confidence score. The result is a … led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus …

… Streamlined genome with precise gene targeting transforms oil-producing … products.    The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated … applications. Engineers could manipulate these natural systems to tune gene activity without permanently altering …

… of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), … Internship co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the … and a teaching assistant for the UC Merced Quantitative and Systems Biology department.   Jonelle Basso , a JGI research …

… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … call recommended including plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a free, open source data … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …

… bacteria, archaea and fungi. We thought this kind of analysis would provide a framework for the evolution of this … as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Facility located at Berkeley Lab. In addition to providing metagenome mining for computational analysis of the AT …

… to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback … a proposal. Describe in detail what you will do with the data! Ideally, you or someone on your team will have … how KBase (www.kbase.us) can support biological data analysis. It is a free, open source analytics platform …

… included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … a team of researchers sought to disrupt every gene in the genome with CRISPR-Cas9 in order to interrogate each one’s … a pool of sgRNA sequences: six for every gene in the genome. The JGI  DNA Synthesis Science team synthesized …

… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying … 2023 Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. Comparative and pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov … Publications …