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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription … are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy … environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … infections can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient … was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. The team infected the …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Pictured from left: [Top row]: Romy Chakraborty, Dawn Chiniquy, Anne Glaesener, Steven Hallam, Marc Hanikenne, Cheryl Kerfeld, Jeffrey Marlow;  … advanced genomic capabilities and access to large-scale data resources. Supported by the Basic Energy Sciences (BES) …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it … ) produces a plethora of antibiotics called zealexins. Even though scientists have identified at least 15 zealexins, … the ability make zealexins, and harnessed gene expression data from these lines to identify genes associated with …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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A Complex Confection Decoded: Sugarcane Reference Genome
… Sugarcane was the last major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how ecosystems are …
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Yasuo Yoshikuni
… Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This program has supported …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in hard-to-reach …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of DOE’s highest honors! Tringe, a microbiologist, was recognized for “advances in … director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … capable of knocking down human RNA the way that CRISPR-Cas9 systems snip DNA. This could eventually lead to applications …
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