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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National … Focus Area funded by the US Department of Energy (DE-AC02-05CH11231 to J.F.B.). The work ( proposal doi: …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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JGI Announces 2026 New Investigator Portfolio
… Doherty, Adrian A. Estrada-Graf, Nicole M. Fernandez; [Row 2]: Zachary Garvin, Chandan Kumar Gautam, Gareth Gillard, … and genome assembly to investigate microbial and plant metabolism across diverse ecosystems — from Antarctic … microbial pathways for high-value bioproducts, and plant–microbe interactions that enhance crop resilience and …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… precise gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid of two … develop genome-scale engineering technologies to control plants and microbes for bioproducts and biomaterial … and Environmental Research program under award no. DE-SC0023027 (to SSM and JLM) with support from the Gordon and …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these long-reads … of the library. 6mA and 4mC (~50x depth), 5mC (~250x depth required). Methylation detection currently only … well for 6mA and 4mC (~50x depth), and can detect 5mC (~250x depth required). Q:  Can DNA modifications be detected …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for over …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy … field sampling and lab cultivation. “We need those lab studies to really understand what the organisms can do. And …
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Toward More Efficient Artificial Photosynthesis
… cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials … them to test composition variants. Summary In the  May 8, 2020 issue of  Science , a team led by Tobias Erb, director of … a DOE Office of Science User Facility (contract no. DE-AC02-05CH11231) with T.J.E. as grantee. J.-C.B. acknowledges …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights into how … The products of photosynthesis are easy to point out. Plants, algae and cyanobacteria create the air we breathe … and longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they inventoried a swath of blueprints to find parts …
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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The fungus that made itself at home
… the brown rot Serpula lacrymans towards breaking down plant mass for conversion to sustainable, alternative … to thrive in manmade environments. As reported January 5, 2018 in The ISME Journal , a team led by University of Oslo … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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