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DAP-seq Drives Robust Mapping of Gene Regulation
… Now, with improvements to DNA Affinity Purification Sequencing (DAP-seq), these barriers are falling. As  … conservation; and integration with single-cell RNA sequencing reveals how transcription factors control gene … (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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From Competition to Cooperation
… relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing …
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iPHoP: A Matchmaker for Phages and their Hosts
… are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… cell. Several years later, the continuing single cell sequencing collaboration between the JGI and Bigelow Lab led …
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Forming Scientific Connections and Building Community
… Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… efforts appear to be redistributing water availability. By sequencing the millet rhizosphere and endosphere communities … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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How Filamentous Fungi Sense Food
… and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to …
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High quality draft genome sequences of Pseudomonas fulva DSM 17717T, Pseudomonas parafulva DSM 17004T and Pseudomonas cremoricolorata DSM 17059T type strains
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Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
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Genome sequence of Phaeobacter inhibens type strain (T5T), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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