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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics … keen interest in the bioenergy and biotechnology potential of algae, and sampling of the length and breadth of algal …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are … (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … carbon captured from the atmosphere in a process that generates energy. The MPI team ultimately aims to develop an …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The … from The Ohio State University and the University of Michigan studying how virus infections cause significant … metabolic changes they’ve undergone. The Impact The number of microbes in, on, and around the planet is an astronomical …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … in natural ecosystems, and functionally explore viral genetic diversity.  In 2021, he was among those selected by …
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JGI-USCCN Strain Sequencing Opportunity
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 2
… and postdoc at Lawrence Livermore National Laboratory, is using bioinformatics and isotopes to track how viruses influence the flow of carbon in permafrost.  …
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JGIota: Sequencing Shiitakes with David Hibbett
… David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and … di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … resonance energy transfer (BRET)-based biosensors. In general, CSL biosensors produce large signal changes, but …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he first needs their DNA.   …
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Filling in the Plant Tree of Life
… we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to … crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from … through the more than 2 million viral sequences available in IMG/VR v3. …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … available for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per …
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