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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have … experiment outlines a roadmap that is transferable to other systems, expanding the technologies available for other JGI … Scientific Research under Award No. FA9550-14-1-0089, the Camille and Henry Dreyfus Foundation, and the JGI Synthesis …
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JGI announces final round of 2022 Functional Genomics awardees
… JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating … Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome …
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She also develops novel flow cytometry protocols for targeted recovery …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and … genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio … that we use as indices. So it’s really quite a broad ecosystem approach. And that led me to get even more interested …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing … bioenergy feedstocks, algae are tiny but mighty. An analysis in the 2017 Bioeconomy Report estimated that the … sequence and then analyze the genomes and multi-omics datasets for algae that can be used for large-scale …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects include … communities — from freshwater estuaries reshaped by dam removal to Antarctica’s photosynthetic mats — to reveal how these systems adapt and contribute to global biogeochemical …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy … nutrient cycling that evolved separately from other similar systems, and offers new clues into a unique environment in …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on marine … go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than 270 water … This work was performed under the auspices of the Scientific Committee on …
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Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By … than 100 at its peak, all the machines were switched off. Over the next two weeks, they were crated, shipped to, and … installed at the  Integrative Genomics Building , JGI’s newly-built home located in the heart of the Berkeley Lab …
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Maureen Berg
… Maureen is currently developing new high-resolution and high-throughput methods to link … understanding of the roles that viruses play in their ecosystems, particularly in freshwater ecosystems. …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying … type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial relationships with …
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