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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the … lands the cover of ACS Synthetic Biology. (Wayne Keefe/Berkeley Lab) For example, the JGI first used CRAGE to … relatives with the BGCs, JGI scientists could relieve BGCs from their former genetic repression, enabling scientists to …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … that showcase our collaborations and capabilities to enable great science that will help solve energy and … Tolerance in Sorghum (EPICON) begins. Peggy Lemaux (UC Berkeley) and her team studied sorghum plants in drought …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of infecting different host species? Or, do they tend to specialize, infecting just a single host? Another wrinkle … their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, scientists have … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, used single-cell sequencing to …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint … – the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific … (JGI)*, a national user facility located at Lawrence Berkeley National Laboratory, and add additional gene …
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SPRUCE-ing Up Science
… is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in his backyard in … ripples through the trees in his backyard. Originally from northern California and one of the first students to … in collaboration with researchers from ORNL, Lawrence Berkeley National Laboratory, the HudsonAlpha Institute for …
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Busting the Unbreakable Lignin
… components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, and two DOE Bioenergy Research … Research of the U.S. Department of Energy grant DE-SC0020420 (MAO), Institute for Collaborative Biotechnologies …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science … Phages … Polymorphisms Created by Transposable Elements … Evolution of the Mitochondria Internship … Cross Species …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … changing planet. In this short audio production, we’ll hear from Ed Hall, an ecologist at Colorado State University in … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … (Try it yourself  here .) She translated her abstract from a 2019 conference. Both versions appear side-by-side … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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The Genome of the Western Clawed Frog Xenopus tropicalis
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The Surprising Structure of a Shrub Willow Sex Chromosome
… strategy we are far more familiar with: differentiating into male and female sexes. For the first time, the sex … the study’s international team, which included scientists from Oak Ridge National Laboratory and the U.S. Department … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute … scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … (VEGA) Symposium , which will take place later this year in Berkeley, Calif. Convening the “viral ecogenomics” …
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