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DAP-seq Drives Robust Mapping of Gene Regulation
… to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … paper and Technical Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … Berkeley National Laboratory. “These proteins’ binding preferences are very, very stable over long evolutionary …
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Doubling Down on Known Protein Families
… of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … with 8 billion metagenome genes from IMG (the study also references data from the JGI’s  Genomes from Earth’s … ‘unknown unknowns’) was vastly greater than that of the reference genomes — by at least double.  “As we keep on …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … the world, finding over 125,000 partial and complete viral genomes. That study multiplied the number of known viral … ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified …
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2024 Progress Report
… Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … Over the last year, the U.S. Department of Energy Joint Genome Institute has continued its journey to realize our … The organisms on our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine …
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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Trends in Prokaryotic Evolution Revealed by Comparison of Closely Related Bacterial and Archaeal Genomes ▿
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Metagenome-assembled genomes reveal unique metabolic adaptations of a basal marine Thaumarchaeota lineage
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Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.
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Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal
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Complete Genome Sequence of the Plant Growth-Promoting Endophyte Burkholderia phytofirmans Strain PsJN
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Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment▿ †
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Genomic adaptations of the green alga Dunaliella salina to life under high salinity
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