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… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of … of green sulfur bacteria with long standing virus-host interactions. ISME J.   15 , 1569–1584 Roux, S. et al. …

… accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of …

… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … of fast, multithreaded bioinformatics tools designed for analysis of DNA and RNA sequence data.  … Datasets … BBTools …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …

… data set will help identify how different elements of the ecosystem interact and respond to changes in the … water-quality regulation. Focusing on the rhizosphere and interactions between the trees, microbes and soil chemistry … is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by the U.S. …

FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program …

… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … viral diversity. “Although the technical challenges of data analysis at this scale are formidable.” Computational Sieves … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …

The focus of this group, in recent years, has been to bring … The developed strains represent an additional phase of user-accessible project types, in which DNA-based … chromosomally integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …

UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other … in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …