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A near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated … now uses laser microdissection to selectively isolate and sequence microbial aggregates after first imaging with …
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Evidence for Lignocellulose-Decomposing Enzymes in the Genome and Transcriptome of the Aquatic Hyphomycete Clavariopsis aquatica
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Comparative Genomics and Transcriptomics to Analyze Fruiting Body Development in Filamentous Ascomycetes
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … insights on crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom Fragilariopsis cylindrus . At that time, they noted … different ocean latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With …
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Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels
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Comparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in Fungi
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A single-base resolution map of an archaeal transcriptome
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JGIota: Looking Back at Sequencing for Soybeans
… fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into soybean’s …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… power of plants, and the lessons they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern … a chromosomal genome assembly and associated methylome, transcriptome and metabolome analyses for C-fern that was …
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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