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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … Filling in the Plant Tree of Life … Fungal Dataset … Plant Datasets …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to … to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha …
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Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned?
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Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … generation of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic …
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Draft Genome Sequence of Microdochium bolleyi, a Dark Septate Fungal Endophyte of Beach Grass
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Uncovering Sequence and Structural Characteristics of Fungal Expansin‐Related Proteins With Potential to Drive Substrate Targeting
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program. … first legume species with a published complete draft genome sequence. At the time, the vital global source of both …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied … AMGs in soil viruses thought to break down chitin, the gene sequences were cloned by the JGI.  The JGI’s DNA synthesis … and AMGs. It could spawn future research into understanding why these AMGs exist in the first place, and what function …
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Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation
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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many … and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of modern, …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of …
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