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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm … previously published fungal genomes on the JGI data portal MycoCosm . They looked for genes known to be involved in … a European Research Council starting grant (MICRORULES 758003), the ‘Priority Programme: Deconstruction and …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural … and annotations are available on JGI’s fungal portal  MycoCosm . Based on these analyses, we conducted further … energy.gov/science/office-science . … Morel Mushrooms on MycoCosm Data Portal …
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User Programs
…   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should Apply? … call Check back Spring 2026 for the FY27 call Sept. 9, 2025 Jan. 29, 2026 Review Date June 2025 August 2025 November …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … fungal guilds in a range of different locations. They sampled soils in four forest ecosystems, extracted RNA to … Grigoriev said. All of these genomes are available at  MycoCosm . If initially, the task of mapping fungal RNA to …
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Natural Prodcast Episode 12: Nadine Ziemert
… to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of secondary … on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber to be a really valuable …
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The unique metabolism of SAR11 aquatic bacteria
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address … … GENESPACE tracks regions of interest and gene copy number variation across multiple genomes. It provides …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… fungi of Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State University, … at the time. Following the publication of their paper in 2011, Dr. Sekimoto from University of British Columbia and Dr. … visit  energy.gov/science/office-science . … Olpidium on MycoCosm Data Portal …
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Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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The survivor strain: isolation and characterization of Phormidium yuhuli AB48, a filamentous phototactic cyanobacterium with biotechnological potential
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acCRISPR: an activity-correction method for improving the accuracy of CRISPR screens
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