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JGI Snapshot
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The Earth BioGenome Project 2020: Starting the clock
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Webinars on Offerings & Capabilities
Below are a list of webinars that can help you through the submission process … the capabilities and resources available for your project. Watch all the webinars here . You can find … Research shows researchers how to tap into the capabilities of the Advanced Photon Source when applying to the FICUS …
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … The machine “learned” to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact …
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Workforce Development & Education Outreach
… to enter the STEM workforce by fostering an understanding of our role in advancing the energy and environmental … … The JGI and UC Merced have had a long-standing internship partnership that started in the summer of 2014. … Modeled on … Lab K-12 program, the JGI collaborates with Biotech Partners to host students transitioning from high school to …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use … genome and releases it to the community. 2014: GENCODE project begins. To support growing sorghum and other C4 …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… viruses — to support scientists around the world. Most of those researchers send their samples in from afar, … with names — but not doors — and robots handle a bunch of benchwork. …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary … research, “Natural Prodcast” serves as an important line of communication to the scientific community. Host Dan … current and future developments, and how the JGI can be part of that space.   …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research … But nearby the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … choice Glycerol stock of sequence verified clone depends on project DNA Synthesis Combinatorial libraries Multiple genes … ( IMG ), methylation analysis 131/176 Microbial Single Particle Sort Draft quality assembly of amplified genomes …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what …
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