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…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users … genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and …

Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the … they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …

All staff members of the US Department of Energy (DOE) Joint Genome Institute … operations and scientific relevance and quality. … The Fungal & Algal Advisory Committee is chartered to offer …

… really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of … population representing the full library.   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … on the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species … of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE …

Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. Students also worked with their mentors …

… fellow Vincent Wu worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the activity, … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …

… wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what …

… and isotopes to track how viruses influence the flow of carbon in permafrost.  …

This series is the story of a giant metagenome assembly from Wisconsin’s Lake … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research … But nearby the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense …

… of 21 fields appear on the 2019 list. Congratulations to: Project Manager Kerrie Barry, Cross-Field Category Fungal and Algal Program head Igor Grigoriev , Plant & … about the project . Igor Grigoriev and Asaf Salamov were part of a team that presented the first large analysis of an …