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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied … of life.  Using the IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down chitin. A … ( https://doi.org/10.46936/cpcy.proj.2021.60161/60000437 ) under the FICUS program to JEM and used resources at the …
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Insights into the dynamics between viruses and their hosts in a hot spring microbial mat
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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Temporal dynamics in a red alga dominated geothermal feature in Yellowstone National Park
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 … industry. When Director Nigel Mouncey joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand … Our User Programs entail a competitive, proposal-based process including …
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized … The majority of JGI projects come from the user community. Find …
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
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Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem
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10 From JGI on the 2019 Highly Cited Researchers List
… were involved in that were reported on over the last year: Kerrie Barry and Jeremy Schmutz worked with a … to develop guidelines and best practices for defining virus data quality. Reported in Nature Biotechnology, the … of the JGI plant portal Phytozome, which is overseen by 2017 Highly Cited Researcher David Goodstein. Go here to learn …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … ever assembled. The team identified 15 core genes shared across all fungi, and found that some of these genes have … Information's GenBank. This led to identifying 6,467 of those assemblies, or roughly 70%, to contain …
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