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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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Identifying genomic data use with the Data Citation Explorer
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DAS Tool for Genome Reconstruction from Metagenomes
… been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … DAS Tool, the team applied it to assemblies from both simulated and real microbial communities and examined the …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group … gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate … for assembly by Gibson, Yeast recombination and Golden Gate methods SynTrack and associated tools, which track samples …
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MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … of white. To researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and … Notable Stories …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale AI-ready data and professional expertise to support the global … across critical sectors: Energy and bioproducts: JGI user research advances understanding of biological processes …
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A roadmap for equitable reuse of public microbiome data
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Chromosome-scale shotgun assembly using an in vitro method for long-range linkage
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An expanded evaluation of protein function prediction methods shows an improvement in accuracy
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