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Community Science Program
… Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Strain Engineering
… The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional … For further details, please reach out to the Group Lead …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the … The Impact Understanding how individual microbes interact with each other in a community, and characterizing their … from complex metagenomes than any of the single binning tools alone,” primarily because of its capacity to harness …
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Science Programs
… The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend … of user projects, develop cutting-edge approaches for and with users, and create computational tools and resources for them. Their concerted efforts help …
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Frequently Asked Questions: Proposal Submission
… successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, … Many of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal …
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Neha Varghese
… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic … and implementation of microservices in conjunction with the IMG platform. …
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Bioboxes: standardised containers for interchangeable bioinformatics software
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Partners
… and develops others providing complementary expertise to advance the science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our … (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data functionality. Close …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic … annotation and classification framework that combines and builds on two standard techniques for identifying viruses … data and access the geNomad tool to conduct their research. Designed to reduce the effects of taxonomic representation …
Learn more
How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and …
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GenomeVISTA—an integrated software package for whole-genome alignment and visualization
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