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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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A roadmap for equitable reuse of public microbiome data
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Partners
… The JGI leverages its existing partnerships and develops others providing complementary … our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA … DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … article detailing how forest floors, in particular the soil microbiome, recover post-wildfire . He and  Tringe were also … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates … filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal also reviewed and assigned …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … Linking lignin engineering to drought stress resilience: RNA-seq and … Elucidating Sphagnum microbiome genetic interactions for improved … Adaptive strategies in a cosmopolitan and abundant soil bacterium: genetic …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial … SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … ways they're working to make this technique, SIP, more standardized -- more reproducible, more reusable, and more …
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. … — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. …
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metagRoot: a comprehensive database of protein families associated with plant root microbiomes
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research … initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale …
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Disclaimer
… NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … neither the United States Government nor the University of California nor any of their employees, makes any …
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