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… fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine … a mycobiome culture collection consisting of fungal species from natural Arabidopsis populations around Europe. The JGI …

… researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds in the … harnessed a community-science program to collect samples from across the country to standardize the process. They … resource that provides information at multiple scales from genes to the community level. The Impact Rivers are …

… agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and phytoplankton … the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is advancing … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… that the project had already received enthusiastic support from the JGI Director, Nigel Mouncey. Jonathan credits his … Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The class had to sift through over 55 billion … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …

… is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … long time. But we know now that most of those pathways come from bacteria that actually live within, say, the sponges or …

… challenges.   Scanning the California oak woodlands from the air, large swaths of the bleached, skeletal remains … which imperils soybean harvests. The subsequent comparative analysis of these two pathogens, led by the JGI and Virginia … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …

… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from academia, industry, and government organizations for …

… in the project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] … research, and I hope to be able to share a few more stories from there as we go forward. And Marc’s quickly built up a … give a little bit of background: Mark is a friend of mine from the company that we used to work at together called …

… This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in Jupiter Florida. This … don’t really have any trouble understanding him, but I know from the download stats that we actually have a lot of listeners downloading this from countries all over the world – as many from outside the …

… photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … in cold, but fecund polar waters. “A lot of our food comes from the North Atlantic, North Pacific and South Pacific … that influence algal diversity and gene expression. Sailing from pole to pole on four research cruises, they dipped …