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… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really …

… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … for still larger efforts in diverse plant species beyond models,” he said. Cole annotated cell types in the plant …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress …

… trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop …

… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … While are still working on finalizing the tree and related publication the tree is still in development and not … Q1. Are all based on PFAM classification-only and/or other reference DB (citable)? Q2. Is it possible to download these …

… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … populated by algal genomes thus defined. We also have some reference plant genomes to help with comparative studies of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Leveraging decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … epilepsy and subsequently generated one of the first mouse models for this common neurological disorder. In 1999, he …

… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … studied? Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps …