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FY2023 Spending Profile The JGI is funded primarily by the DOE …

… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … multiple types of payloads, such as individual genes, whole pathways, genome-editing tools, and reporters.” … University of British Columbia, recently deployed CRAGE to rapidly label  E. coli  in order to monitor population …

… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Images of giant miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably … The generation of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core …

… community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year … and operational themes and objectives for the next five years. It also includes more than 130 … of individual organisms or environmental DNA, and then using advanced capabilities to understand their inner …

… and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …

… analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and … through distributed data infrastructure and linked data technologies. The NMDC seeks to connect and engage the …

… staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs Tanja …

… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work … development of automated analysis pipelines for standard sequencing products performed at scale. Our group also …

… of cell-free based expression platforms: Only 10-20% of BGCs are expressed under standard laboratory … We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … from Agri-Food Canada at Summerland BC aimed to generate whole genome data of Olpidium. This required an enormous … re-visit the Olpidium genome data . Taking the advantage of rapid development of binning methods, we were able to …