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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Natural Prodcast Episode 14: Nigel Mouncey
… work that we’re doing, single cell work we’re doing. And using these together along with all of our computational … whole set of bioassays here at JGI. We don’t have the infrastructure. It’s too many resources for us. So we need good … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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A roadmap for equitable reuse of public microbiome data
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JGI@25: From Life at the Extremes to Editing Genomes
… one in 2018 on the discovery of miniature CRISPR-associated proteins that can target single-stranded DNA. Such proteins … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … doi: 10.1038/s41467-017-01408-4. Tyson GW et al. Community structure and metabolism through reconstruction of microbial …
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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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Uncovering Sequence and Structural Characteristics of Fungal Expansin‐Related Proteins With Potential to Drive Substrate Targeting
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Webinars on Offerings & Capabilities
… . You can find additional webinars covering how to use our data portals here.  …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of …
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Identifying genomic data use with the Data Citation Explorer
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DAS Tool for Genome Reconstruction from Metagenomes
… validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to reconstruct … and soil from the Angelo Coast Range Reserve in California. Using DAS Tool on data from soil samples, researchers were …
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
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