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The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … that allow us to select specific uncultivated microbes for sequencing based on their level of metabolic activity …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… them are actinobacteria. And so we get a lot of them from databases of organisms, so things like the NRL database - or … the biosynthetic genes for the hormones are also right next door to these receptors as well. And so oftentimes, the … technology.] BETSY PARKINSON: OK. DNA affinity purification sequencing. And so the way this essentially works is you …

Below are a list of webinars that can help you through the … . You can find additional webinars covering how to use our data portals here.  … … Shining a Light: Advanced Photon … Research shows researchers how to tap into the capabilities of the Advanced Photon Source when applying to the FICUS …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a … Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our work at the …

… call recommended including plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a … Wisconsin Institute for Discovery (WID) are interested in sequencing secondary metabolite-producing environmental … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

… – problems that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, … so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify … at archive.jgi.doe.gov/user-programs . Thanks, and see you next time!  … Episode Transcript …   … This is the first …

A workflow for capturing the genetic make-up of specific … for members of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast …

… and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences … probably been since the last decade. We have a lot more data. Obviously, there’s been a lot of sequencing going on, … you want to collaborate, let us know!  Thanks, and see you next time! … Episode Transcript …   … This the third episode …

For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology and metabolomics capabilities …

… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …