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Examples: Successful LOIs & Submissions
… for User Science calls. These documents have been shared with permission from the PIs who drafted them.  … …
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A Plant Root Atlas for Tracking Developmental Trajectories
… the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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DOE JGI Interns Share Their Summer Experiences
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A Collaboration to Improve Plant Genome Annotations Across Species
Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha … from the data yet? Are there any specific examples you can share? Avinash: Yes, I will mention two here. The main … pinpoint and rank biologically relevant and evolutionarily conserved genes that could be potential future targets for …
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Green Algae Reveal One mRNA Encodes Many Proteins
… on a single molecule of mRNA – in two species of green algae, Chlamydomonas reinhardtii and Chromochloris … . “I was scrutinizing the genes of one of our species of algae and kept seeing what looked like mistakes by the gene … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Brachypodium: A monocot grass model system for plant biology
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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The Case for Conservation
… reference genome sequences of the male and female plants, each representing a single set of chromosomes, are … genome references are now available for male and female plants of fire moss. Most notably, the work revealed that … with a plant’s sex. One outcome could be superfemale plants that have increased fruit and seed yield. Conversely, …
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Genome Insider
… understand — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and bacteria to contribute to …
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A One-Stop Shop for Analyzing Algal Genomes
… anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can browse the … proteins. PhycoCosm’s built-in connection to the DOE Systems Biology Knowledgebase (KBase) also allows …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of biomass … years evolving tactics against potential threats. “Because plants can’t run away, they’ve evolved these really tough … plant biomass. Here, cud-chewers like goats, sheep and cows share an important talent. In their herbivorous lives, they …
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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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