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Natural Prodcast Episode 17: Cassandra Quave
I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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User Programs
… accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single … to their resources. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified … to the cleanup by continuing to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. …
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … group. It’s just a massive amount of sequencing.”  A Resource for Many Applications Kellogg noted that C4 crops … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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IMG/M: integrated genome and metagenome comparative data analysis system
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PhycoCosm, a comparative algal genomics resource
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, … software suite, BBTools , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . …
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … portals and tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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