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DOE Metrics
… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …
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Natural Prodcast Episode 16: Marcy Balunas
… work we’ve determined that the ANMG deposits those bacteria into the jelly coat of the eggs. And so these eggs are laid … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of … “hook” of fluorescence-activated cell sorting to sort cells into several small pools, followed by whole genome … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Community Science Program
… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … call is for projects that translate genomic information into biological function. The  New Investigator and …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… is found in nearly all types of bacteria and interacts with cell signaling networks that control many basic cellular … at the University of California, Berkeley and the Joint Genome Institute, a DOE Office of Science User Facility, … were synthesized as codon optimized sequences and cloned into the Nano-lantern scaffold. Because the biosensors are …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers … of Energy national user facilities – the DOE Joint Genome Institute and the Molecular Foundry – both located at … performing activities similar to the specialized animal cells or osteoblasts that make HAp. JGI researchers …
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Laminarin stimulates single cell rates of sulfate reduction whereas oxygen inhibits transcriptomic activity in coastal marine sediment
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. … about virus-infected microbial cells that are transformed into virocells, and how the outcomes of these infections can … between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The … and climate is estimated to be larger than any other single plant genus. Peatlands accumulate partially … microhabitats – Sphagnum fallax and S. magellanicum. The draft genome for  S. fallax is already available on the  JGI …
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Cell by cell: population genetics in the wild
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Draft genome of Rosenbergiella nectarea strain 8N4T provides insights into the potential role of this species in its plant host
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its kind ever … that some of these genes have moved from the mitochondria into the nuclear genome over evolutionary time. They also …
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