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Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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Identifying the Microbial Cleanup Crew at a Superfund Site
… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … a (microbial) community to clean up a Superfund site. The Impact The Comprehensive Environmental Response, …
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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is … the distributed and dynamic metabolite networks of environmental microbes and how they transform their environment. …
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Small partners, big impacts
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Analysis of Leaf and Root Transcriptomes of Soil-Grown Avena barbata Plants
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Host genotype controls ecological change in the leaf fungal microbiome
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Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …
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The Switchgrass Genome: Tools and Strategies
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Strain Engineering
The focus of this group, in recent years, has been to bring … little to no genetic tools enabling heterologous expression and functional exploration.  The developed strains … integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … oceanic depths and relying on different ways of living. The Impact Microbes help regulate the global carbon cycle — …
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