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A genetic linkage map for the ectomycorrhizal fungus Laccaria bicolor and its alignment to the whole‐genome sequence assemblies
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a … researchers at the University of Texas at Austin produced a high-quality reference sequence of the complex switchgrass … data portal Phytozome. The combination of field data and genetic information has allowed the research team to …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … cell genomics, DNA synthesis, and metabolomics.   … Deputy of Genomic Technologies …
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JGI on the 2021 Highly Cited Researchers List
Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … in natural ecosystems, and functionally explore viral genetic diversity toward innovative biotechnological and …
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Improved chromosome-level genome assembly and annotation of the seagrass, Zostera marina (eelgrass)
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Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … and role models for the community, demonstrating the highest standards of ethical conduct guided by the JGI and …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Congratulations to the 2023 Highly Cited Researchers from the JGI recognized for their … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … tool called geNomad that identifies and classifies mobile genetic elements based upon their gene content and their …
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Picking Up Threads of Cotton Genomics
… authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  … with the JGI Plant Annotation pipeline, which provides high quality comparisons of these genomes within themselves … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Old can be new again: HAPPY whole genome sequencing, mapping and assembly
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … are dominant carbon and nitrogen fixers in alpine and high latitude ecosystems, deciphering their internal … finding that each lichen partner can sexually reproduce: genetic recombination during sex could increase the fitness …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … Why is a resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the … plants but not the ammonium. These results highlight differences in plants’ response to nitrate …
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