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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … applications.  We are interested in:  characterizing novel enzymatic activities using phylogenomic driven …
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Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii
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Cell-free prototyping enables implementation of optimized reverse β-oxidation pathways in heterotrophic and autotrophic bacteria
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other … flagella in an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows … known to produce flagella — propeller-like structures that enable organisms to swim around. However, genome and …
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Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The … particularly sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to … community from geothermal hot springs, they uncovered a novel cellulose-degrading bacterium typically found in low … shotgun sequencing. The team first tested the approach on bacterial laboratory models to set a reference for its …
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Exploring novel alkane-degradation pathways in uncultured bacteria from the North Atlantic Ocean
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … to be able to do this. JGI and EMSL’s contributions were enabled by the Facilities Integrating Collaborations for …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure … genome annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze data on scales …
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Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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