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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … to enable great science that will help solve energy and environmental challenges. In 2009, researchers at the JGI … in carbon fixation in the dark ocean. Combining single cell genomics and synthetic biology, a team studying microbial …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome … of iconic JGI contributions to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold … survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for understanding how … each site and the role they fulfilled suggest that specific environmental conditions — like temperature, pH levels or …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This … advancement in sort of both areas. And I suspect that no single change will resolve the problem. But that stepwise … the chemistry in order to start to make predictions about environmental roles of these compounds? Can we perform …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine … coexist is key for understanding their impact on wider ecosystems, but these symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … This research was supported in part by the Allen Distinguished …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge … sequencers and platforms dedicated to synthesis, single-cell analyses and metabolomics. At the same time, the …
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Genomic sequencing of single microbial cells from environmental samples
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial … metatranscriptomes), as well as the genomes of single cells of the uncultivated SAR324. The constellation … This research was supported by grants from the Simons Foundation (#329108 … SAR324 on IMG/M Data portal …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene … handling 18 different species is beyond the capacity of a single lab. Growing different species poses significant …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled to … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … public databases and recovered more than 3,000 others from environmental datasets. All of the annotations and data  are … mitochondrial genes as reliable markers for classifying species and studying diversity in complex biological …
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Opening doors to physical sample tracking and attribution in Earth and environmental sciences
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