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Plant Program
… the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is advancing … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of … , which guide the relationships we nurture in our workplace and seek to establish with our stakeholders. In working …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … viral diversity. “Although the technical challenges of data analysis at this scale are formidable.” Computational Sieves … While most organism’s genetic information is encoded in DNA, with RNA delivering the instructions inside DNA to the …
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Transductomics: sequencing-based detection and analysis of transduced DNA in pure cultures and microbial communities
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs and draw from the …
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Behind the Paper: Hot Springs Metagenomics
Adapting the graduate research experience amidst a global …
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Doubling Down on Known Protein Families
Research Center  Alexander Fleming. “This was a massive analysis of 1.3 billion proteins with massively parallel … the process hinges on referencing to existing genome sequences.  Some of these proteins are what the scientists … those with pivotal applications in biotechnology, such as DNA editing enzymes.” Leveraging Protein Families in a New …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the DOE …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy … the perennial grass Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into …
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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a coral host, a photosynthetic microalgae, and a little-characterized …
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Natural Prodcast Episode 19: Bill Fenical
We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready to send those for genomic analysis. And of course, we don’t know anything about the … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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