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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities through working directly with … Overall, our aim is to inspire students and established professionals to explore opportunities in STEM by providing … of the JGI’s role in enabling complex biological and environmental systems research.  …
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What Happens Underground Influences Global Nutrient Cycles
… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  … omics and computational resources with JGI’s cutting-edge genomics, DNA synthesis and complementary capabilities. …
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Improving the Cacao Genome and Phytozome
… Cocoa Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global … fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … improved  T. cacao Matina 1-6 genome is now available for comparative purposes on the latest version of the JGI plant …
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Silver age of GOLD introduces new features
… standards freely available, and enabling large-scale comparative genomics analysis initiatives. GOLD not only curates … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked … U.S. Department of Energy Joint Genome Institute …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … along the way, impacting its quality and in turn affecting environmental and human health, energy production and … immediately explore and reuse the data from the GROWdb for comparative analyses with their own data on the KBase …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … all five cotton lineages and of cotton D are available for comparative analysis on JGI’s plant data portal  Phytozome , … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Mike Sneddon
… Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … leader in data, software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late … Director of Scientific Computing at Predicine, an NGS-based clinical cancer diagnostics company, where he led the …
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University of California, Merced Internship Program
… graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include … than 90 UC Merced students have contributed to the research of numerous JGI scientists. Interns say their experiences …
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JGI@25: Using Team Science to Build Communities Around Data
… for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … of Georgia, along with 100 of his colleagues in the comparative plant genomics community. The project’s aim is … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … annual JGI User Meeting, as well as input on other aspects of the meeting such as duration, location, and cost; …
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A roadmap for equitable reuse of public microbiome data
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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