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In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The class had to sift through over 55 billion … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …

… with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The … J., Martin, J., Terry, A. et al. The DNA sequence and comparative analysis of human chromosome 5. Nature. 431, 268–274 (2004). …

… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … said co-first author Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data … Microbial Genomes & Microbiomes (IMG/M) database. In their analysis, the team found that bacterial isolate genomes …

Large-scale comparative analysis leads to identification of biosynthetic gene … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program …

… lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and … Crete, Greece … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …

… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to enable users to … access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level …

By studying the structure and function of a cyanobacterial protein, researchers have new insights … Blaby, through what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized … facilities that we worked with are cutting edge in terms of analysis and the fascinating results that we managed to …