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…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …
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I-Min (Amy) Chen
… in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data … I-MA et al. IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata. Nucleic … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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DOE Metrics
…     2,140     Q4 2025 175     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is … [Download PDF] Q2 – Report on progress developing new experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint … before you see toxin. And we have some preliminary data with other samples that we do see days to a week of a … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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Ten Years of Maintaining and Expanding a Microbial Genome and Metagenome Analysis System
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Webinars on Offerings & Capabilities
Below are a list of webinars that can help you through the submission process by better understanding the capabilities and resources available for your … . You can find additional webinars covering how to use our data portals here.  … … Shining a Light: Advanced Photon …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of …
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis … upon their line of scientific inquiry by leveraging JGI experimental, computational and personnel resources for …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss … Jonathan’s email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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