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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … advanced our understanding of 1 billion years of evolution in Kingdom Fungi — from phylogenetic relationships … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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2025 NeLLi Symposium
… students and postdocs): $250      Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis.  …
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Mapping the Earth’s Hidden Fungal Kingdom
… species — dwarfing the diversity of plants. To put this evolutionary timescale in perspective, the genus Aspergillus … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …
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Multisubstrate specificity shaped the complex evolution of the aminotransferase family across the tree of life.
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … access to diverse datasets that deepen our understanding of how organisms interact with each other and with their …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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The complex polyploid genome architecture of sugarcane
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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CSP Large Scale Call
… and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … While applications will be accepted that address any aspect of these mission areas, priority will be given to projects that address the areas of special emphasis that are listed in the call and leverage …
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Jeremy Schmutz
… back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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