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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad … discoverability and accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for further science.  Notices Data Portal files will be …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management … Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The class had to sift through over 55 billion … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint … to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … Then you have to maybe improve some of your bioinformatic analysis. You don’t want to get clusters that are encoding …
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Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
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Project Management Office
… The JGI Project Management Office carries out a number of activities to … help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s project. See below for details on each step. … Please review our FAQ in advance of contacting the PMO office.  …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   … and other data produced at scales amenable to statistical analysis. To meet these needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell analyses and …
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A call for standardized classification of metagenome projects
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Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US … States. They also provided multiple access points to the information. The team harnessed a community-science program to … The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so that researchers could …
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Fluorometric Analysis of Carrier-Protein-Dependent Biosynthesis through a Conformationally Sensitive Solvatochromic Pantetheinamide Probe
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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