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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … multiply. Over time, plants lose many genes after such events, returning their genomes to a diploid state while … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Jeremy Schmutz
… from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … hallii . Nature Communications 9: 5213. Huang, P et al. 2017. Sparse panicle1 is required for inflorescence …
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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
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Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis
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10 From JGI on the 2019 Highly Cited Researchers List
Category Fungal and Algal Program head Igor Grigoriev , Plant & Animal Science category Plant Program Library … Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs … of the JGI plant portal Phytozome, which is overseen by 2017 Highly Cited Researcher David Goodstein. Go here to …
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Ecological generalism drives hyperdiversity of secondary metabolite gene clusters in xylarialean endophytes
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CRAGE-CRISPR facilitates rapid activation of secondary metabolite biosynthetic gene clusters in bacteria
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Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… measurements of primary and secondary metabolites from plants, microorganisms, and environmental samples using … Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy Institute (JBEI). … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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Brachypodium: A monocot grass model system for plant biology
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A Plant Root Atlas for Tracking Developmental Trajectories
… the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements in sequencing technologies … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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