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New Lineages of Life Group
Our research is focused on the discovery and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … an expanded complement of translation system components. Science, 356 (6333), 82-85 Schulz et al. (2016) A …
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as … … Find more details on the instrumentation we use and our methodology for metabolite analyses.  … Read more about …
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How Filamentous Fungi Sense Food
… networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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Natural Prodcast Episode 15: Katherine Duncan
… into secondary metabolites? Kate Duncan: So I always liked science in school. I wouldn’t say I was one of these people … so I have an undergraduate in chemistry. Now when I was in fourth year, we had a choice to do an integrated master’s … years to improve gender equality of people entering science programs. So actually, the number of women entering science …
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Natural Prodcast Episode 19: Bill Fenical
… years. And I really want to make sure that we talk about your place in the field, because you’ve been at this for a … who, today, run full-fledged marine chemical ecology programs. Two of the great students are in Georgia, in … to then switch from financial support from the National Science Foundation to financial support from the National …
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SPRUCE-ing Up Science
… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … expertise, a combination of biology and computer science, to reveal clues about how microbial and bacteria … sitting on the [Walnut Creek] campus … It was a resource-rich environment,” Lawrence said. While interning, he …
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Synthetic Biology Lab
… applications group. The DNA synthesis and assembly group: Our production group operates as user facility that aims to … including PacBio and Illumina.  The synthetic biology user science group: The applications group is focus on developing … in:  characterizing novel enzymatic activities using phylogenomic driven approaches, and understanding the design …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… you. Anyway…I’m really happy today to be handing over our interview with Dr Elizabeth (or Betsy) Parkinson from … transcripts, and show notes with links to papers around the science we talked about, at natural prodcast dot com. So, … students, we obviously can't put any antibiotics or antifungals in there. So they get just a smattering. JACKIE: …
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Approved Proposals
Click the cards below to view a downloadable pdf of accepted proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating …
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A Social Science Experience
… 2017 Summer Interns Share Highlights of their time at the JGI …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for … of Work document. … Shining a Light: Advanced Photon Source Capabilities for FICUS Research describes the … design, please contact Tanja Woyke, Deputy for User Programs. Technical and Scientific Leads will also be …
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