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New Vision, New Mission, New Plan: The JGI’s Next Five Years
Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of … In service of solutions that will impact society, the 2024 strategic plan introduces the JGI’s new vision to lead … path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities … and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for support from 53 received through a joint …
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Fungal Friends or Foes in Plant Roots
… toward filling gaps on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled … Office of Science of the U.S. DOE under Contract No. DE-AC02-05CH11231 within the framework of CSP 1974 “1KFG: …
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Expanding Virophage Diversity
… the number of known high quality virophage genome sequences 10-fold through computational approaches. By mining more … genome size range from 13.8-29.3 kilobases (Kb) to 10.9-42.3 Kb. Additionally, the gene counts have similarly …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many …
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Mindfully Moving JGI
October 18, the production sequencing labs in Building 100 were silent. Twenty years after the JGI united the … maximum) maintained by a workforce that numbered more than 100 at its peak, all the machines were switched off. Over … heart of the Berkeley Lab main campus. On Monday, November 11, a week after they’d been  moved to Berkeley , two of the …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… giant. The genomes of giant viruses are on the order of 100 times the size of what has typically been associated … viruses, while the genomes of large viruses may be only 10 times larger. And yet, while they are found everywhere, … proteins, and virus diversity in this group expanded 10-fold from just 205 genomes, redefining the phylogenetic …
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Data Ecosystem
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David Goodstein
… manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert … gene copy number variation across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant Pan-Genomics Comes of Age . Annual Review of Plant Biology 72, 411. Gordon et al., 2020.  Gradual polyploid genome evolution …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of … as well as biotechnology. NeLLi August 24 – 25, 2023 Session Speakers:   Laura Hug , University of Waterloo …
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2024 Progress Report
… in our new Strategic Plan , which was released in April 2024 — through serving an increased number of users with a … We closed our 2018 Strategic Plan at the end of September, 2023 with over 90% of our two- and five-year milestones  … have already completed 37% of the two-year milestones, and 11% of the five-year milestones. … Highlights arising from …
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Effects of Polar Light Cycle on Microbial Food Web
… cycles. Water samples from Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A … was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program (project … the US Department of Energy under contract no. DE-AC02-05CH11231. Computational analyses at UNSW Sydney were performed …
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