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Events
Learn more
UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate …
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JGI Portals
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A Collaboration to Improve Plant Genome Annotations Across Species
… plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, mostly related to … Avinash: In the initial planning phase, there were about 10 groups that came together to standardize the experimental …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed … Alliance of Canada-Compute Canada facilities. The work (10.46936/10.25585/60001017) conducted by the U.S. Department … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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Microbiome Data Science Team
… from the human gut microbiome. Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and … Reveal Thousands of Small, Novel Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from … of metagenomics software. Nature Methods  14(11):1063-1071 Bowers RM, et al. (2017) Minimum information about a …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
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Expanding Virophage Diversity
… the number of known high quality virophage genome sequences 10-fold through computational approaches. By mining more … genome size range from 13.8-29.3 kilobases (Kb) to 10.9-42.3 Kb. Additionally, the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we provide a global …
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The Expanding Universe of Methane Metabolisms in Archaea
… by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new … Marker genes for diverse methane metabolisms Of the 10 MAGs reconstructed in the study, five were from …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… chromosomes. These sequences account for approximately 12% of the total human genome, which itself was finally … of human chromosome 19 . Nature. 428, 529–535 (2004). doi:10.1038/nature02399 Schmutz, J., Martin, J., Terry, A. et al. …
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Crysten Blaby-Haas
… for Science, 2020 NIH NRSA Postdoctoral Fellowship (F32), 2012 – 2015 Bright Futures Academic Scholarship, 2002 – 2006 … the heme-binding split-barrel family. J Biol Chem  300(11), 107888. Grosjean N, Yee EF, Kumaran D, Chopra K, Abernathy … aminopeptidase. Cell Reps 39 (7), 110834. (Subject of News and Views Article in Nature 608, 38-39 (2022) and …
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